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charged pyridine uncharged pyridine

charged pyridine

(PDB scatterplots for charged and uncharged pyridine are identical, because the groups are indistinguishable in protein crystal structures; More Information)


General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

General
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any C,N,O,S or H 9945 9993    
any polar X-H (X= N,O or S) 4977 4813  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

C,H only
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any alkyl C-H 4971 6073  
methylene 1592 1537  
methyl 1945 2525  
any aromatic C-H 4963 3031  
substituted aromatic carbon 2473 500  
phenyl 966 581  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

N-H
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any NH 4955 1733  
any uncharged NH 1717 *  
any cationic NH 4991 *  
aromatic cationic N-H 2496 *  
amide NH 337 516  
uncharged C(sp2)/C(ar)-NH2 882 *  
cationic RNH3 60 238  
cationic R3NH 12 *  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

O-H
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any OH 4980 2963  
alcohol OH 593 409  
phenol OH 1426 342  
water 3318 2212  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid


Other N or O
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
aromatic or sp2 N 2479 99  
cyano 620    
pyramidal R3N 5 *  
uncharged planar R3N 379 6  
cationic planar R3N 5    
any terminal O 4989 3243  
any C=O 4993 3243  
amide C=O 669 1428  
ester C=O 144    
carboxylate 2460 1208  
aliphatic ether 166    
linking O in esters 54    
aromatic O 51    
sulfoxide/sulfone O 84    
nitro 1769 *  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Sulfur
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any S 5000 268  
any C=S 1298    
aliphatic thioether 8 131  
aromatic S 127    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Halo/Halide
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any C-F 1901    
any C-Cl 1597    
any C-Br 817    
any C-I 383    
chloride ion 3190    
bromide ion 779    
iodide ion 363    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/Halide| Alkali Metal| Amino acid

Alkali Metal
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
lithium ion        
sodium ion 24    
potassium ion 16    
rubidium ion        
cesuim ion 3    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Amino acid
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
CONH2 280 346  
imidazole * 344    
guanidinium * 231    
* This search has not been done.




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