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aliphatic-aliphatic amine, pyramidal aliphatic-aromatic amine; planar aliphatic-aromatic amine; pyramidal aromatic-aromatic amine; planar aromatic-aromatic amine; pyramidal charged aliphatic-aliphatic amine

charged aliphatic-aliphatic amine

(PDB scatterplots include both charged and uncharged aliphatic-aliphatic amine groups, because the groups are indistinguishable in protein crystal structures; More Information)


General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

General
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any C,N,O,S or H 9974 2328    
any polar X-H (X= N,O or S) 2495 1258  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

C,H only
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any alkyl C-H 3510 119  
methylene 261 16  
methyl 173 21  
any aromatic C-H 954 141  
substituted aromatic carbon 427 9  
phenyl 81 24  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

N-H
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any NH 466 173  
any uncharged NH 74 *  
any cationic NH 367 *  
aromatic cationic N-H   *    
amide NH 20 11  
uncharged C(sp2)/C(ar)-NH2 20 *  
cationic RNH3 34 62  
cationic R3NH   *    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

O-H
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any OH 2029 1078  
alcohol OH 405 34  
phenol OH 109 98  
water 727 946  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid


Other N or O
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
aromatic or sp2 N 281 3  
cyano 61    
pyramidal R3N 1 *  
uncharged planar R3N 6    
cationic planar R3N        
any terminal O 4992 882  
any C=O 4199 882  
amide C=O 31 314  
ester C=O 45    
carboxylate 1888 556  
aliphatic ether 684    
linking O in esters 23    
aromatic O 20    
sulfoxide/sulfone O 18    
nitro 111 *  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Sulfur
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any S 1725 13  
any C=S 86    
aliphatic thioether 1 6  
aromatic S 4    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Halo/Halide
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any C-F 112    
any C-Cl 66    
any C-Br 19    
any C-I 4    
chloride ion 1575    
bromide ion 334    
iodide ion 75    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/Halide| Alkali Metal| Amino acid

Alkali Metal
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
lithium ion        
sodium ion 39    
potassium ion 19    
rubidium ion 2    
cesuim ion        
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Amino acid
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
CONH2 12 69  
imidazole * 76    
guanidinium * 3    
* This search has not been done.




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