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charged imidazole uncharged imidazole

charged imidazole

(PDB scatterplots for charged and uncharged imidazole are identical, because the groups are indistinguishable in protein crystal structures; More Information)


General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

General
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any C,N,O,S or H 9989 1992    
any polar X-H (X= N,O or S) 3680 843  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

C,H only
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any alkyl C-H 2379 749  
methylene 489 161  
methyl 525 375  
any aromatic C-H 1665 309  
substituted aromatic carbon 400 30  
phenyl 103 58  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

N-H
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any NH 1677 188  
any uncharged NH 880 *  
any cationic NH 803 *  
aromatic cationic N-H 693 *  
amide NH 33 24  
uncharged C(sp2)/C(ar)-NH2 14 *  
cationic RNH3 77 99  
cationic R3NH   *    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

O-H
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any OH 2003 613  
alcohol OH 160 51
phenol OH 105 102  
water 743 460
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid


Other N or O
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
aromatic or sp2 N 245 14  
cyano 82    
pyramidal R3N   *    
uncharged planar R3N 5    
cationic planar R3N        
any terminal O 3588 317  
any C=O 2103 317
amide C=O 63 113
ester C=O 29    
carboxylate 946 144  
aliphatic ether 93    
linking O in esters 12    
aromatic O 1    
sulfoxide/sulfone O 10    
nitro 237 *  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Sulfur
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any S 347 35  
any C=S 31    
aliphatic thioether 4 22  
aromatic S 10    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Halo/Halide
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any C-F 102    
any C-Cl 118    
any C-Br 46    
any C-I 6    
chloride ion 239    
bromide ion 77    
iodide ion 38    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/Halide| Alkali Metal| Amino acid

Alkali Metal
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
lithium ion        
sodium ion 8    
potassium ion 12    
rubidium ion        
cesuim ion        
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Amino acid
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
CONH2 15 89  
imidazole * 54    
guanidinium * 66    
* This search has not been done.




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