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charged pyridine uncharged pyridine

uncharged pyridine

(PDB scatterplots for charged and uncharged pyridine are identical, because the groups are indistinguishable in protein crystal structures; More Information)


General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

General
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any C,N,O,S or H 9885 9993    
any polar X-H (X= N,O or S) 4994 4813  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

C,H only
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any alkyl C-H 4934 6073  
methylene 1997 1537  
methyl 1997 2525  
any aromatic C-H 4989 3031  
substituted aromatic carbon 2497 500  
phenyl 1423 581  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

N-H
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any NH 4951 1733  
any uncharged NH 4971 *  
any cationic NH 1854 *  
aromatic cationic N-H 1044 *  
amide NH 1650 516
uncharged C(sp2)/C(ar)-NH2 1681 *  
cationic RNH3 174 238
cationic R3NH 19 *  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

O-H
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any OH 4980 2963  
alcohol OH 3246 409
phenol OH 3319 342  
water 3296 2212
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid


Other N or O
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
aromatic or sp2 N 3293 99  
cyano 3221    
pyramidal R3N 215 *  
uncharged planar R3N 2107 6  
cationic planar R3N 156    
any terminal O 4987 3243  
any C=O 4994 3243
amide C=O 1627 1428  
ester C=O 1971    
carboxylate 1370 1208
aliphatic ether 657    
linking O in esters 1309    
aromatic O 590    
sulfoxide/sulfone O 740    
nitro 2462 *  
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Sulfur
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any S 9988 268  
any C=S 2828    
aliphatic thioether 122 131  
aromatic S 1265    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Halo/Halide
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
any C-F 4994    
any C-Cl 4941    
any C-Br 2922    
any C-I 3257    
chloride ion 993    
bromide ion 436    
iodide ion 434    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/Halide| Alkali Metal| Amino acid

Alkali Metal
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
lithium ion 5    
sodium ion 53    
potassium ion 67    
rubidium ion 1    
cesuim ion 17    
* This search has not been done.

General| C,H only| N-H| O-H| Other N or O| Sulfur| Halo/halide| Alkali Metal| Amino acid

Amino acid
 Links to statistical data  Links to theoretical energy data
Contact Group CSD PDB Stats Theory
CONH2 1628 346  
imidazole * 344  
guanidinium * 231    
* This search has not been done.




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